Research Project

Biofilm-MRT – Understanding the limitations in hydrogenotrophic and/or aerophilic productive biofilms using an MRI-based in-vivo method for the combined quantification of reactant gradients, mass transfer characteristics, and biomass growth

Developing novel magnetic resonance imaging methods to characterize living biofilms in-situ and understand the factors limiting their productivity

The aim of this project is to further develop MRI for investigating the spatial distribution of biomass density, mass transfer properties, as well as substrate (O2 and H2) and pH gradients in hydrogenotrophic and/or aerophilic biofilms. Thus, their influence on reaction rates and biomass growth will be determined.

For this purpose, a biofilm of C. necator will be experimentally examined in an MRI scanner during its growth. Using different MR techniques, the morphology as well as the spatially resolved pH, O₂ and H₂ concentrations within the biofilm will be characterized and locally resolved effective diffusion coefficients within the biofilm will be determined.

Furthermore, we will expose the biofilms of C. necator to quorum sensing molecules and use these MR methods to dynamically investigate their effects on architecture and productivity as a function of local pH and oxygen conditions.

Local reactant concentrations and bio-mass growth rate rX to be determined by MRI

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Team

Sven Kerzenmacher

Sven Kerzenmacher

Phone: +49 421 218 63330

Email: Kerzenmacher@uni-bremen.de

Ekkehard Küstermann

Ekkehard Küstermann

Phone: +49 421 218 63091

Email: ekke@uni-bremen.de

Christina Roggatz

Christina Roggatz

Phone: +49 421 218-56658

Email: croggatz@uni-bremen.de